Looking good Dwigth!
Yes LEDs are tricky to dim, especially if additional PWM dimming is used for lighting effects. You might consider getting some higher resistor values, so you don't have to connect bunch in series. There are resistor kits available on eBay and amazon with entire ranges of values (in either conventional resistors with leads, or SMD) and in various power ratings. Those kits are not very expensive.
As for the light bleed, I just use a coating of silver or black paint. Sometimes multiple layers. Sometimes I use both, black and silver paint. That can totally block even very strong light through translucent plastic. I have also used thin aluminum (not the crappy cloth) duct tape to block the light, but since it is conductive, one has to be careful how and where to use.