Lou, we've done the frame swap for people at the shop for DCCing GP-40's, sometimes a swipe with a very, very fine file or a sanding stick will clean a burr off the frame. The metal part of the trucks with the holes in them, also sometimes have burrs in them that a hobby knife and a bit of patience can clear out. Actually, the holes in the trucks have given me more problems than the frames for fit and binding. Get the bright light and the magnifiers out, and you may see some "stuff" in that hole. And (GASP!!!!) I've had the same problem with a couple of new Kato's too. We're talking thousandths of inches here. I can see that much change in cutting new dies in what, 8-10 years? Not making excuses, but stuff happens.
Mark, it's possible to make the GP-40 tank fit onto the GP-38/38-2 frame with some careful Demel work (or very tedious file work). I think I remember needing to glue the GP-40 tank to the GP-38 frame using silcone sealer because it was a very loose fit, but I may have slept since then.